Information for 14-GTCTGTGCACCA (Motif 9)


Reverse Opposite:

p-value:1e-203
log p-value:-4.683e+02
Information Content per bp:1.703
Number of Target Sequences with motif1629.0
Percentage of Target Sequences with motif4.02%
Number of Background Sequences with motif886.0
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets168.6 +/- 90.6bp
Average Position of motif in Background216.5 +/- 190.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGCACCA---
NNGTATGTGCACATNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGCACCA---
NTNTATGTGCACATNNN

RCS1(MacIsaac)/Yeast

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTCTGTGCACCA
-----TGCACCC

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGTGCACCA
NNGCGTGTGTGCNGCN

PHYPADRAFT_182268/MA1008.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTGCACCA
TTGTCGGTGA----

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCTGTGCACCA
WDNCTGGGCA---

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTGCACCA
VBSYGTCTGG------

PHYPADRAFT_28324/MA1023.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCTGTGCACCA
TGTCGGTG-----

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCTGTGCACCA
NYYTGTTTACHN

MET28(MacIsaac)/Yeast

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCTGTGCACCA
--CTGTGG----