Information for 10-CAGCACCCACAT (Motif 6)


Reverse Opposite:

p-value:1e-323
log p-value:-7.449e+02
Information Content per bp:1.669
Number of Target Sequences with motif3745.0
Percentage of Target Sequences with motif9.24%
Number of Background Sequences with motif2705.3
Percentage of Background Sequences with motif3.63%
Average Position of motif in Targets177.7 +/- 103.4bp
Average Position of motif in Background231.9 +/- 196.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAGCACCCACAT-
--GTACCCGCATN

ERF043/MA0996.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGCACCCACAT
---CACCGACA-

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAGCACCCACAT
--GCACCC----

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGCACCCACAT-
---CRCCCACGCA

PCF2(TCP)/Oryza sativa/AthaMap

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGCACCCACAT
TGGGGCCCAC--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGCACCCACAT--
--NWAACCACADNN

RAP1(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGCACCCACAT--
--ACACCCATACAC

YPR022C/MA0436.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAGCACCCACAT
----CCCCACG-

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGCACCCACAT-
---TACCCGCATN

MET28/MA0332.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CAGCACCCACAT
------CCACAG