Information for 8-TTGCAGAGGACC (Motif 5)


Reverse Opposite:

p-value:1e-345
log p-value:-7.962e+02
Information Content per bp:1.642
Number of Target Sequences with motif4084.0
Percentage of Target Sequences with motif10.08%
Number of Background Sequences with motif2995.2
Percentage of Background Sequences with motif4.02%
Average Position of motif in Targets186.5 +/- 113.3bp
Average Position of motif in Background225.2 +/- 188.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGCAGAGGACC
CATTTCCTGAGAAAT

ttk/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TTGCAGAGGACC
-----CAGGACC

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGCAGAGGACC
TTCCKNAGAA--

RME1(MacIsaac)/Yeast

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGCAGAGGACC
-TCCAAAGGAA-

NRG1/MA0347.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGCAGAGGACC---------
-NGCNNTGGACCCTGATNNNG

RME1/MA0370.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGCAGAGGACC
-TCCAAAGGAA-

ttk/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGCAGAGGACC
---GCCAGGACC

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTGCAGAGGACC
----TTAGGAC-

NRG1(MacIsaac)/Yeast

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TTGCAGAGGACC--
-------GGACCCT

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTGCAGAGGACC
----GCAGGACC