Information for 6-TAACTCCAGTTC (Motif 4)


Reverse Opposite:

p-value:1e-472
log p-value:-1.088e+03
Information Content per bp:1.697
Number of Target Sequences with motif3144.0
Percentage of Target Sequences with motif7.76%
Number of Background Sequences with motif1462.9
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets167.3 +/- 84.8bp
Average Position of motif in Background231.5 +/- 195.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAACTCCAGTTC--
--ACTACAATTCCC

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAACTCCAGTTC-
GGGTTACTANAGGTCA

YLR278C/MA0430.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAACTCCAGTTC
-AACTCCGG---

URC2/MA0422.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAACTCCAGTTC
NTATCTCCGN---

ARG81/MA0272.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAACTCCAGTTC
GTGACTCT-----

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TAACTCCAGTTC-
NNGAGGTTACTNNAGGTCA

kni/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAACTCCAGTTC-
TTGNTCCAGTTTT

ARG81(MacIsaac)/Yeast

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAACTCCAGTTC
GTGACTCN-----

STB5/STB5_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAACTCCAGTTC
TATAACACCG----

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAACTCCAGTTC
TGACTC------