Information for 23-CGCGGCCG (Motif 21)


Reverse Opposite:

p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.659
Number of Target Sequences with motif1110.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif1544.1
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets246.9 +/- 149.5bp
Average Position of motif in Background225.3 +/- 92.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RDS1/MA0361.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CGCGGCCG
-NCGGCCG

RDS1(MacIsaac)/Yeast

Match Rank:2
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CGCGGCCG
--CGGCCG

Adf1/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGGCCG
CGCGGTCG

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:4
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CGCGGCCG-
-TCGGCCGA

YLL054C/MA0429.1/Jaspar

Match Rank:5
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CGCGGCCG-
--CGGCCGA

RSC3/MA0374.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CGCGGCCG
CGCGCGG-

ERF094/MA1049.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGCGGCCG
CGCCGCCG

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCGGCCG
CGCCGCC-

SeqBias: CG-repeat

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCGGCCG--
CGCGCGCGCG

RSC30/MA0375.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGCGGCCG
CGCGCGCG