Information for 2-GGHACTGCABBC (Motif 2)


Reverse Opposite:

p-value:1e-1231
log p-value:-2.835e+03
Information Content per bp:1.616
Number of Target Sequences with motif7584.0
Percentage of Target Sequences with motif18.72%
Number of Background Sequences with motif3479.5
Percentage of Background Sequences with motif4.67%
Average Position of motif in Targets190.8 +/- 104.2bp
Average Position of motif in Background228.7 +/- 184.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGHACTGCABBC
GGGATTGCATNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GGHACTGCABBC--
AATCGCACTGCATTCCG

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-11
Orientation:reverse strand
Alignment:-----------GGHACTGCABBC
TGGCCANNNNNGGAACTGCA---

SOK2/MA0385.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGHACTGCABBC-
--ACCTGCAGGCA

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGHACTGCABBC
--NGNTGCAGGN

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGHACTGCABBC
---ANTGCACCC

ABI3/MA0564.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGHACTGCABBC-
----CTGCATGCA

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGHACTGCABBC
-TNCCTGCA---

CST6(MacIsaac)/Yeast

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGHACTGCABBC
-NAAATGCA---

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGHACTGCABBC
TGGAACAGMA---