Information for 24-CAGGTTCAATTC (Motif 19)


Reverse Opposite:

p-value:1e-78
log p-value:-1.818e+02
Information Content per bp:1.667
Number of Target Sequences with motif837.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif560.7
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets183.7 +/- 114.9bp
Average Position of motif in Background232.9 +/- 200.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAGGTTCAATTC--
CAGTTTCGNTTCTN

ct/MA0218.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CAGGTTCAATTC
---GTTCAA---

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGGTTCAATTC-
-ASTTTCACTTCC

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGGTTCAATTC--
TCAGTTTCATTTTCC

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAGGTTCAATTC--
--GTTTCACTTCCG

OPI1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAGGTTCAATTC
--GATTCGA---

HSF1/MA0319.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAGGTTCAATTC
--TGTTCCAT--

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTTCAATTC--
TNAGTTTCGATTTTN

OPI1/MA0349.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGGTTCAATTC
-CGGTTCG----

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGGTTCAATTC
-NNGTTCAAGN-