Information for 7-AGGGCAYY (Motif 15)


Reverse Opposite:

p-value:1e-149
log p-value:-3.438e+02
Information Content per bp:1.885
Number of Target Sequences with motif5958.0
Percentage of Target Sequences with motif14.71%
Number of Background Sequences with motif7099.8
Percentage of Background Sequences with motif9.52%
Average Position of motif in Targets177.6 +/- 97.0bp
Average Position of motif in Background211.4 +/- 174.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGCAYY---
NNNNTTGGGCACNNCN

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAYY
NGTGGGCAT-

PHD1(MacIsaac)/Yeast

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGGGCAYY
-AGGCAC-

TRB2/MA1073.1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAYY
TTAGGGCA--

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAYY
TNNGGGCAG-

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAYY
AAGGTCAC-

RGM1/MA0366.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGGCAYY
AGGGG---

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCAYY
TCAAGGTCAN-

P0510F09.23/MA1030.1/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGGGCAYY
NNNTAGGGTT--

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAYY
CAAAGGTCAG-