Information for 17-CAAGTGCTCTTA (Motif 12)


Reverse Opposite:

p-value:1e-165
log p-value:-3.820e+02
Information Content per bp:1.586
Number of Target Sequences with motif1549.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif950.1
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets168.0 +/- 102.9bp
Average Position of motif in Background201.7 +/- 188.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAAGTGCTCTTA--
CGAACAGTGCTCACTAT

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGCTCTTA
NTCAAGTGGN----

tin/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTGCTCTTA
TCAAGTG------

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAGTGCTCTTA
CTCAAGTG------

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGCTCTTA
NTCAAGTGG-----

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAAGTGCTCTTA
CCATGTGCTT---

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGCTCTTA
CTCAAGTG------

tin/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTGCTCTTA
TTAAGTGC-----

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTGCTCTTA
TTAAGTGCTT---

tin/MA0247.2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAAGTGCTCTTA
TTTCAAGTGG-----