Information for 16-GTGTTTTGCCTG (Motif 11)


Reverse Opposite:

p-value:1e-190
log p-value:-4.397e+02
Information Content per bp:1.691
Number of Target Sequences with motif1788.0
Percentage of Target Sequences with motif4.41%
Number of Background Sequences with motif1101.8
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets174.6 +/- 108.5bp
Average Position of motif in Background226.4 +/- 187.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2(MacIsaac)/Yeast

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:GTGTTTTGCCTG-
-----TTGCCTGC

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTTTTGCCTG
NNGTANTGTTTTNC---

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTGTTTTGCCTG--
----TTTGCATGGA

MOT3/Literature(Harbison)/Yeast

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTGTTTTGCCTG
------TACCTN

MOT3(MacIsaac)/Yeast

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTGTTTTGCCTG
------TACCTN

MOT3/MA0340.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTGTTTTGCCTG
------TACCTN

pan/dmmpmm(Down)/fly

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGTTTTGCCTG
-TGTTTTT----

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTTTGCCTG-
NNCTTTGTTTTGNTNNN

ara/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTTGCCTG
NNTGTTATTN---

slp1/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGTTTTGCCTG
NTGTTTACATT-