Information for 5-ATCCADTG (Motif 8)


Reverse Opposite:

p-value:1e-34
log p-value:-7.843e+01
Information Content per bp:1.693
Number of Target Sequences with motif4539.0
Percentage of Target Sequences with motif20.67%
Number of Background Sequences with motif12703.4
Percentage of Background Sequences with motif17.02%
Average Position of motif in Targets197.1 +/- 130.2bp
Average Position of motif in Background236.0 +/- 192.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCCADTG-
ACTAGCCAATCA

HAP2/Literature(Harbison)/Yeast

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATCCADTG
--CCAAT-

HAP3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATCCADTG
--CCAAT-

HAP5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATCCADTG
--CCAAT-

HAP5(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATCCADTG
--CCAAT-

HAP3(MacIsaac)/Yeast

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATCCADTG
--CCAAT-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATCCADTG-----
NNNANTGCAGTGCNNTT

HAP2(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATCCADTG--
--CCAATGAG

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATCCADTG--
--CCTTTGTT

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATCCADTG---
--CCATTGTTC