Information for 12-TGTTTTGCCTGC (Motif 7)


Reverse Opposite:

p-value:1e-35
log p-value:-8.216e+01
Information Content per bp:1.692
Number of Target Sequences with motif688.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif1271.4
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets184.9 +/- 112.9bp
Average Position of motif in Background230.1 +/- 194.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:TGTTTTGCCTGC
----TTGCCTGC

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGTTTTGCCTGC-
-----TNCCTGCA

pan/dmmpmm(Down)/fly

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTTTTGCCTGC
TGTTTTT-----

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTTGCCTGC
NNCTTTGTTTTGNTNNN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TGTTTTGCCTGC
NNGTANTGTTTTNC----

NAC058/MA0938.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGTTTTGCCTGC
----TTGCGTGN

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGTTTTGCCTGC--
----TTGCGTGCVA

MOT3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGTTTTGCCTGC
-----TACCTN-

MOT3(MacIsaac)/Yeast

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGTTTTGCCTGC
-----TACCTN-

MOT3/MA0340.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGTTTTGCCTGC
-----TACCTN-