Information for 6-CGCGCGGCGC (Motif 6)


Reverse Opposite:

p-value:1e-39
log p-value:-9.056e+01
Information Content per bp:1.633
Number of Target Sequences with motif2032.0
Percentage of Target Sequences with motif9.25%
Number of Background Sequences with motif4899.4
Percentage of Background Sequences with motif6.56%
Average Position of motif in Targets248.7 +/- 150.9bp
Average Position of motif in Background222.4 +/- 107.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STP1(MacIsaac)/Yeast

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CGCGCGGCGC
--TGCGGCGC

STP1/MA0394.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CGCGCGGCGC
--TGCGGCGC

ERF109/MA1053.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CGCGCGGCGC
--GGCGGCGC

RAP2-10/MA0980.1/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CGCGCGGCGC
--GGCGGCGC

RAP2-6/MA1052.1/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CGCGCGGCGC
--GGCGGCGC

CRF4/MA0976.1/Jaspar

Match Rank:6
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CGCGCGGCGC
--GGCGGCGC

RAP2-3/MA1051.1/Jaspar

Match Rank:7
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CGCGCGGCGC
--GGCGGCGC

STP2/MA0395.1/Jaspar

Match Rank:8
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCGGCGC------
NNGNNGTGCGGCGCCGNTNN

CRF2/MA0975.1/Jaspar

Match Rank:9
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CGCGCGGCGC
--GGCGGCGG

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGCGCGGCGC-
CGTGCGGTGCG