Information for 10-GGTCCTCTGSAA (Motif 5)


Reverse Opposite:

p-value:1e-41
log p-value:-9.482e+01
Information Content per bp:1.668
Number of Target Sequences with motif1414.0
Percentage of Target Sequences with motif6.44%
Number of Background Sequences with motif3109.0
Percentage of Background Sequences with motif4.16%
Average Position of motif in Targets185.2 +/- 114.7bp
Average Position of motif in Background226.7 +/- 177.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGTCCTCTGSAA---
ANTTCTCAGGAANNN

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGTCCTCTGSAA
--TTCTNMGGAA

REI1/MA0364.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGTCCTCTGSAA
---CCCCTGA--

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTCCTCTGSAA----
AATCGCACTGCATTCCG

RME1/MA0370.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGTCCTCTGSAA
-TTCCTTTGGA-

MSN4/Literature(Harbison)/Yeast

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTCCTCTGSAA
--NCCCCTG---

RME1(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGTCCTCTGSAA
-TTCCTTTGGA-

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTCCTCTGSAA
--NSCACTYVAV

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGTCCTCTGSAA
---TNCCTGCA-

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTCCTCTGSAA
ANTTCTNNAGAA