Information for 8-CTGTAACTCCAG (Motif 4)


Reverse Opposite:

p-value:1e-53
log p-value:-1.226e+02
Information Content per bp:1.732
Number of Target Sequences with motif939.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif1678.0
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets172.9 +/- 96.2bp
Average Position of motif in Background223.3 +/- 182.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Bgb::run/MA0242.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGTAACTCCAG
---TAACCGCAA

brk/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTGTAACTCCAG
----AGCGCCA-

ovo/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTAACTCCAG
-AGTAACGG---

STB5/STB5_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTAACTCCAG
-TATAACACCG-

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGTAACTCCAG
--NAAACCACAG

SOK2/MA0385.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGTAACTCCAG---
----ACCTGCAGGCA

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGTAACTCCAG
AATGTATCAAT--

ovo/MA0126.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTAACTCCAG
-AGTAACAGT--

prd/MA0239.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTAACTCCAG
-AGTAACAGT--

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTGTAACTCCAG
ADGGYAGYAGCATCT-