Information for 2-TGCAGTDCCH (Motif 3)


Reverse Opposite:

p-value:1e-143
log p-value:-3.293e+02
Information Content per bp:1.708
Number of Target Sequences with motif2168.0
Percentage of Target Sequences with motif9.87%
Number of Background Sequences with motif3688.8
Percentage of Background Sequences with motif4.94%
Average Position of motif in Targets184.2 +/- 98.5bp
Average Position of motif in Background224.9 +/- 175.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTDCCH
AGATGCAATCCC-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTDCCH--
NNNANTGCAGTGCNNTT

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TGCAGTDCCH----------
TGCAGTTCCNNNNNTGGCCA

PHD1/MA0355.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTDCCH
ACCTGCAGCA---

SOK2/MA0385.1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGTDCCH
NNCCTGCAGGT---

CST6(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCAGTDCCH
TGCATTTN--

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTDCCH
GGGTGCANT----

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCAGTDCCH
TKCTGTTCCA

slbo/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGTDCCH
TTTGCAAT----

slbo/MA0244.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGTDCCH
TTTGCAAT----