Information for 23-GTTAGGCTAC (Motif 22)


Reverse Opposite:

p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.964
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets169.9 +/- 89.0bp
Average Position of motif in Background308.7 +/- 174.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB24/MA1037.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTTAGGCTAC
AAGTTAGGT---

cad/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTAGGCTAC
NTTANGC---

P0510F09.23/MA1030.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGGCTAC
NNNTAGGGTT-

MYB59/MA1042.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTTAGGCTAC
GTTAGGTA--

TRB2/MA1073.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTTAGGCTAC
-TTAGGGCA-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTTAGGCTAC
--TWGTCTGV

MYB46/MA1040.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTAGGCTAC
GTTAGGTA--

gt/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTAGGCTAC---
GTTACGTAATANC

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTAGGCTAC-------
-ACATGCTACCTAATAC

cad/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGGCTAC
NTTTATGAT--