Information for 21-TGCAGGTGTA (Motif 20)


Reverse Opposite:

p-value:1e-15
log p-value:-3.491e+01
Information Content per bp:1.735
Number of Target Sequences with motif457.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif976.7
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets192.4 +/- 121.0bp
Average Position of motif in Background225.5 +/- 194.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTGTA
GACAGGTGTN

TCF3/MA0522.2/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTGTA
NNCAGGTGTN

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTGTA
NNCAGGTGNN

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGCAGGTGTA
AACAGGTGT-

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTGTA
NNCAGGTGCG

esg/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGCAGGTGTA-
NNACAGGTGCNN

sna/MA0086.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TGCAGGTGTA
--CAGGTG--

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTGTA
AACAGGTGNT

sna/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGCAGGTGTA-
NNAACAGGTGCAN

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGCAGGTGTA-
--CAGGTGAGG