Information for 22-AACATGGGTSCT (Motif 19)


Reverse Opposite:

p-value:1e-16
log p-value:-3.782e+01
Information Content per bp:1.762
Number of Target Sequences with motif203.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif316.8
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets198.3 +/- 114.9bp
Average Position of motif in Background227.1 +/- 195.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACATGGGTSCT
CAAGATGGCGGC-

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AACATGGGTSCT
-----GGGTGC-

NRG1/MA0347.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACATGGGTSCT-----
CTAGATCAGGGTCCATCGCA

ttk/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AACATGGGTSCT-
------GGTCCTG

ttk/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AACATGGGTSCT---
------GGTCCTGCC

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AACATGGGTSCT--
------GGTCCTGC

NRG1(MacIsaac)/Yeast

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AACATGGGTSCT
----AGGGTCC-

PL0013.1_hlh-2::hlh-15/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AACATGGGTSCT
GGACCAGCTGGGCCCT

GAT3(MacIsaac)/Yeast

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACATGGGTSCT
ATAACATG------

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AACATGGGTSCT--
-------GTCCTAA