Information for 21-TAAGAGCACTTG (Motif 18)


Reverse Opposite:

p-value:1e-18
log p-value:-4.196e+01
Information Content per bp:1.857
Number of Target Sequences with motif308.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif546.7
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets176.7 +/- 103.9bp
Average Position of motif in Background201.8 +/- 189.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAAGAGCACTTG---
NNNNTGAGCACTGTNNG

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TAAGAGCACTTG--
----ACCACTTGAA

tin/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TAAGAGCACTTG-
------CACTTGA

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TAAGAGCACTTG--
------CACTTGAN

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TAAGAGCACTTG--
-----CCACTTGAA

tin/MA0247.2/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TAAGAGCACTTG---
-----CCACTTGANA

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TAAGAGCACTTG--
------CACTTGAG

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAGAGCACTTG-
---AAGCACTTAA

tin/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TAAGAGCACTTG---
-----CCACTTGAGN

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TAAGAGCACTTG-
---AAGCACATGG