Information for 13-CGWCGCCG (Motif 17)


Reverse Opposite:

p-value:1e-21
log p-value:-4.996e+01
Information Content per bp:1.656
Number of Target Sequences with motif2445.0
Percentage of Target Sequences with motif11.13%
Number of Background Sequences with motif6661.1
Percentage of Background Sequences with motif8.92%
Average Position of motif in Targets246.0 +/- 154.1bp
Average Position of motif in Background228.1 +/- 120.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Os05g0497200/MA1034.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CGWCGCCG
CGCCGCCA

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGWCGCCG-
TGTCGCCGC

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGWCGCCG
CGCCGCC-

ERF094/MA1049.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGWCGCCG
CGCCGCCG

RAP2-3/MA1051.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGWCGCCG
GCGCCGCC-

Mad/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGWCGCCG-
GCGNCGCCNG

RAP2-6/MA1052.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGWCGCCG
GCGCCGCC-

ERF008/MA0979.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGWCGCCG
GGGCGGCG

ERF3/MA1005.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGWCGCCG
CGCCGCCA

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGWCGCCG
CCGCCGCC-