Information for 20-GGCCCCGGCGCG (Motif 16)


Reverse Opposite:

p-value:1e-22
log p-value:-5.086e+01
Information Content per bp:1.584
Number of Target Sequences with motif1081.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif2573.1
Percentage of Background Sequences with motif3.45%
Average Position of motif in Targets244.0 +/- 151.4bp
Average Position of motif in Background225.7 +/- 108.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKN7/SKN7_H2O2Lo/[](Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGCCCCGGCGCG
GGCCCNGGC---

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCCGGCGCG
CAGGCCNNGGCCNN

NHP10/MA0344.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGGCGCG
-TCCCCGGC---

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCCCCGGCGCG
GGCCCCGCCCCC

SUT1?/SacCer-Promoters/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGCCCCGGCGCG
---CCCCGCGC-

brk/dmmpmm(Down)/fly

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGCCCCGGCGCG
----CCGGCGCT

SKN7(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCCCCGGCGCG
GGCCCGGA----

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCCCCGGCGCG
-GCGCCTGCGCA

brk/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCCCCGGCGCG
----CTGGCGCC

brk/MA0213.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCCCCGGCGCG
----CTGGCGCC