Information for 16-THATGTGBAT (Motif 14)


Reverse Opposite:

p-value:1e-22
log p-value:-5.177e+01
Information Content per bp:1.476
Number of Target Sequences with motif1152.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif2767.8
Percentage of Background Sequences with motif3.71%
Average Position of motif in Targets183.6 +/- 121.1bp
Average Position of motif in Background233.6 +/- 200.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

tin/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:THATGTGBAT
TCAAGTG---

tin/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:THATGTGBAT
TCAAGTG---

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-THATGTGBAT
BTBRAGTGSN-

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:THATGTGBAT
TTRAGTGSYK

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----THATGTGBAT--
AAATTCAAGTGGNTTN

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-THATGTGBAT
NTCAAGTGGN-

tin/MA0247.2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--THATGTGBAT
TTTCAAGTGG--

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----THATGTGBAT--
AATNTTAAGTGGNTNN

tin/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:THATGTGBAT
TTAAGTGC--

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:THATGTGBAT
TTGAGTGSTT