Information for 19-TATCTGCATGTA (Motif 13)


Reverse Opposite:

p-value:1e-24
log p-value:-5.551e+01
Information Content per bp:1.852
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif112.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets167.4 +/- 93.5bp
Average Position of motif in Background221.8 +/- 212.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

LEC2/MA0581.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TATCTGCATGTA
-ATGTGCATGNN

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TATCTGCATGTA
--TTTGCATGGA

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TATCTGCATGTA
----TGCATGCA

ABI3/MA0564.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TATCTGCATGTA
---CTGCATGCA

SOK2/MA0385.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TATCTGCATGTA
NNCCTGCAGGT-

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TATCTGCATGTA-----
TAAATACATGTAAAATT

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TATCTGCATGTA
TTCATTTGCATAT-

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TATCTGCATGTA-----
AATATACATGTAATATA

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TATCTGCATGTA
-ATTTGCATAT-

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TATCTGCATGTA-----
AAAATACATGTAAAAAT