Information for 14-GCGCGGCCGCCG (Motif 10)


Reverse Opposite:

p-value:1e-27
log p-value:-6.245e+01
Information Content per bp:1.530
Number of Target Sequences with motif3126.0
Percentage of Target Sequences with motif14.23%
Number of Background Sequences with motif8558.1
Percentage of Background Sequences with motif11.46%
Average Position of motif in Targets248.4 +/- 153.4bp
Average Position of motif in Background223.8 +/- 108.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.94
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF094/MA1049.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GCGCGGCCGCCG
----CGCCGCCG

RDS1/MA0361.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCGCGGCCGCCG
--NCGGCCG---

RDS1(MacIsaac)/Yeast

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GCGCGGCCGCCG
---CGGCCG---

Adf1/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCGCGGCCGCCG
-CGCGGTCG---

Mad/MA0535.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCGCGGCCGCCG
CAGGCGCCGCCGCCG

ERF13/MA1004.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GCGCGGCCGCCG
----CGCCGCCA

ERF098/MA0999.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCGCGGCCGCCG
---CCGCCGCC-

ERF4/MA0992.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCGCGGCCGCCG
---CCGCCGCC-

ERF096/MA0998.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCGCGGCCGCCG-
---CCGCCGCCAT

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCGCGGCCGCCG
---CCGCCGCC-