| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
PDF |
| 1 |  | CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-11261 | -2.593e+04 | 0.0000 | 33920.0 | 60.83% | 3297.4 | 4.67% | motif file (matrix) |
pdf |
| 2 |  | BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-10566 | -2.433e+04 | 0.0000 | 35431.0 | 63.54% | 5128.9 | 7.27% | motif file (matrix) |
pdf |
| 3 |  | CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-436 | -1.005e+03 | 0.0000 | 3437.0 | 6.16% | 1067.5 | 1.51% | motif file (matrix) |
pdf |
| 4 |  | Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-73 | -1.694e+02 | 0.0000 | 9636.0 | 17.28% | 9571.2 | 13.57% | motif file (matrix) |
pdf |
| 5 |  | NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-31 | -7.355e+01 | 0.0000 | 11927.0 | 21.39% | 13196.5 | 18.70% | motif file (matrix) |
pdf |
| 6 |  | Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-26 | -6.085e+01 | 0.0000 | 25454.0 | 45.65% | 30075.1 | 42.63% | motif file (matrix) |
pdf |
| 7 |  | Unknown3/Drosophila-Promoters/Homer | 1e-13 | -3.218e+01 | 0.0000 | 1171.0 | 2.10% | 1075.0 | 1.52% | motif file (matrix) |
pdf |
| 8 |  | THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-6 | -1.590e+01 | 0.0000 | 5058.0 | 9.07% | 5819.3 | 8.25% | motif file (matrix) |
pdf |
| 9 |  | Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.110e+01 | 0.0007 | 12236.0 | 21.94% | 14796.0 | 20.97% | motif file (matrix) |
pdf |
| 10 |  | SeqBias: G/A bias | 1e-4 | -1.107e+01 | 0.0007 | 55762.0 | 100.00% | 70533.0 | 99.97% | motif file (matrix) |
pdf |
| 11 |  | SeqBias: polyC-repeat | 1e-3 | -8.457e+00 | 0.0075 | 55740.0 | 99.96% | 70487.6 | 99.91% | motif file (matrix) |
pdf |
| 12 |  | PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-2 | -5.785e+00 | 0.0991 | 4781.0 | 8.57% | 5745.2 | 8.14% | motif file (matrix) |
pdf |
| 13 |  | E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.688e+00 | 0.1008 | 17431.0 | 31.26% | 21553.3 | 30.55% | motif file (matrix) |
pdf |