Information for 9-AGTGCTCTTAAC (Motif 6)


Reverse Opposite:

p-value:1e-100
log p-value:-2.308e+02
Information Content per bp:1.691
Number of Target Sequences with motif3443.0
Percentage of Target Sequences with motif6.17%
Number of Background Sequences with motif2539.7
Percentage of Background Sequences with motif3.60%
Average Position of motif in Targets168.6 +/- 102.6bp
Average Position of motif in Background216.2 +/- 229.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTCTTAAC
CGAACAGTGCTCACTAT

bap/MA0211.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGTGCTCTTAAC
----CACTTAA-

bap/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGTGCTCTTAAC-
---NCACTTAANN

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGTGCTCTTAAC
-----TCTTATC

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTCTTAAC
TTAAGTGCTT-----

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTGCTCTTAAC
--NSCACTYVAV

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AGTGCTCTTAAC
NATTTAAGTACTTNAAA-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTGCTCTTAAC
-AASCACTCAA-

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGTGCTCTTAAC
---GCACTTAA-

tin/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGTGCTCTTAAC
----CACTTAA-