Information for 8-TCTTSCAGAGGA (Motif 5)


Reverse Opposite:

p-value:1e-103
log p-value:-2.381e+02
Information Content per bp:1.668
Number of Target Sequences with motif4484.0
Percentage of Target Sequences with motif8.04%
Number of Background Sequences with motif3552.3
Percentage of Background Sequences with motif5.03%
Average Position of motif in Targets173.6 +/- 103.0bp
Average Position of motif in Background227.2 +/- 224.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCTTSCAGAGGA--
CATTTCCTGAGAAAT

RME1/MA0370.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCTTSCAGAGGA-
---TCCAAAGGAA

RME1(MacIsaac)/Yeast

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCTTSCAGAGGA-
---TCCAAAGGAA

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCTTSCAGAGGA
--TTCCKNAGAA

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTTSCAGAGGA
-ATGCCAGACN-

HSF1/MA0319.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTTSCAGAGGA
TGTTCCAT----

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTTSCAGAGGA
TTTTCCA-----

ARO80/MA0273.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTTSCAGAGGA-----
NNNNANTTNCCGAGANNTNNC

XBP1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTTSCAGAGGA
-CTTCGAG----

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCTTSCAGAGGA-
------AGAGGAA