Information for 24-AKGAMAGGATAG (Motif 19)


Reverse Opposite:

p-value:1e-6
log p-value:-1.490e+01
Information Content per bp:1.786
Number of Target Sequences with motif165.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif114.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets189.3 +/- 131.2bp
Average Position of motif in Background237.5 +/- 192.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AT/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AKGAMAGGATAG
ATGAACGAAT--

ttk/MA0460.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AKGAMAGGATAG-
----AAGGATAAT

FZF1/MA0298.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AKGAMAGGATAG
------TGATAG

ttk/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AKGAMAGGATAG-----
---CAAGGATAATCNAA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AKGAMAGGATAG---
----AAGGATATNTN

ttk/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AKGAMAGGATAG
----CAGGACC-

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AKGAMAGGATAG--
AAGATAAGATAACA

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AKGAMAGGATAG-
ACTATGAATGAATGAT

GLN3/MA0307.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AKGAMAGGATAG
-------GATAA

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AKGAMAGGATAG--
--NDCAGGAARTNN