Information for 12-TCCAGGAG (Motif 15)


Reverse Opposite:

p-value:1e-43
log p-value:-1.011e+02
Information Content per bp:1.799
Number of Target Sequences with motif7389.0
Percentage of Target Sequences with motif13.25%
Number of Background Sequences with motif7540.7
Percentage of Background Sequences with motif10.69%
Average Position of motif in Targets194.0 +/- 120.6bp
Average Position of motif in Background234.1 +/- 209.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGGAG--
GNNTCAGGTGAN

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGGAG--
GNNTCAGGTGAN

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCCAGGAG--
NNCAGGTGNN

sna/MA0086.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCCAGGAG
--CAGGTG

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCCAGGAG--
NNCAGGTGCG

REI1/MA0364.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCCAGGAG
-TCAGGGG

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCCAGGAG--
NNCAGGTGTN

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TCCAGGAG-
NNNCTTTCCAGGAAA

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCCAGGAG--
AACAGGTGNT

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCCAGGAG--
GACAGGTGTN