Information for 13-GTCTGTGYACCA (Motif 11)


Reverse Opposite:

p-value:1e-71
log p-value:-1.654e+02
Information Content per bp:1.673
Number of Target Sequences with motif1316.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif750.8
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets168.1 +/- 93.4bp
Average Position of motif in Background220.0 +/- 227.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGYACCA---
NNGTATGTGCACATNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGYACCA---
NTNTATGTGCACATNNN

RCS1(MacIsaac)/Yeast

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTCTGTGYACCA
-----TGCACCC

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCTGTGYACCA
NYYTGTTTACHN

INO4/MA0322.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCTGTGYACCA
GCATGTGAA---

FOXO6/MA0849.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGYACCA
---TGTTTAC--

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCTGTGYACCA
WDNCTGGGCA---

FKH2/MA0297.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGYACCA
---TGTTTAC--

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCTGTGYACCA
--CTGTTTAC--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTGYACCA
VBSYGTCTGG------