Information for 12-AGAGATGGCTCA (Motif 10)


Reverse Opposite:

p-value:1e-78
log p-value:-1.808e+02
Information Content per bp:1.711
Number of Target Sequences with motif3658.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif2946.4
Percentage of Background Sequences with motif4.18%
Average Position of motif in Targets173.4 +/- 111.5bp
Average Position of motif in Background215.3 +/- 235.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN(var.2)/MA0489.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAGATGGCTCA-
AGGAGATGACTCAT

BATF::JUN/MA0462.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGAGATGGCTCA
-GAAATGACTCA

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATGGCTCA
AACAGATGGC---

pros/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAGATGGCTCA
AGNCATG-----

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGATGGCTCA-
--GGATGACTCAT

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAGATGGCTCA-
----ATGACTCAT

GCN4(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAGATGGCTCA
----ATGACTCA

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAGATGGCTCA----
AGAGCGGGGTCAAGTA

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGATGGCTCA-
--GGATGACTCAT

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAGATGGCTCA--
---CATGACTCATC