Information for 11-TCTGCAAGAGCA (Motif 8)


Reverse Opposite:

p-value:1e-98
log p-value:-2.263e+02
Information Content per bp:1.647
Number of Target Sequences with motif4573.0
Percentage of Target Sequences with motif10.04%
Number of Background Sequences with motif4941.1
Percentage of Background Sequences with motif6.62%
Average Position of motif in Targets172.4 +/- 102.1bp
Average Position of motif in Background217.6 +/- 197.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCTGCAAGAGCA
--TGGAACAGMA

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCAAGAGCA------
NNCCTGNAAAAAAAAAAAAA

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCAAGAGCA------
NNCCTGNAAAAAAAAAAAAA

XBP1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCTGCAAGAGCA
-CTCGAAG----

SOK2/MA0385.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAAGAGCA
ACCTGCAGGCA--

RLR1(MacIsaac)/Yeast

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAAGAGCA--
ACCTGAAAGAACTGT

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCAAGAGCA
TNCCTGCA------

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTGCAAGAGCA
--TGGAAAA---

Trl/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTGCAAGAGCA-
---GAGAGAGCAA

Trl/MA0205.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCTGCAAGAGCA-
---GAGAGAGCAA