Information for 6-AACTGGAGTTAC (Motif 5)


Reverse Opposite:

p-value:1e-129
log p-value:-2.971e+02
Information Content per bp:1.690
Number of Target Sequences with motif1915.0
Percentage of Target Sequences with motif4.21%
Number of Background Sequences with motif1357.2
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets172.4 +/- 91.4bp
Average Position of motif in Background233.9 +/- 205.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

kni/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACTGGAGTTAC
AAAACTGGAACAA-

YLR278C/MA0430.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACTGGAGTTAC
--CCGGAGTT--

ARG81/MA0272.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AACTGGAGTTAC
----NGAGTCAC

ARG81(MacIsaac)/Yeast

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AACTGGAGTTAC
----NGAGTCAC

URC2/MA0422.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AACTGGAGTTAC
--CCGGAGATAA

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AACTGGAGTTAC--
TGACCTNTAGTAACCC

prd/dmmpmm(Down)/fly

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AACTGGAGTTAC
AAACTG-------

kni/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACTGGAGTTAC
AAAANTGGANCAA-

ETV2/MA0762.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AACTGGAGTTAC
AACCGGAAATA-

HAP1/MA0312.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AACTGGAGTTAC
---CGGAGATA-