Information for 6-CAGYTCCC (Motif 4)


Reverse Opposite:

p-value:1e-171
log p-value:-3.958e+02
Information Content per bp:1.746
Number of Target Sequences with motif14013.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif17487.9
Percentage of Background Sequences with motif23.41%
Average Position of motif in Targets186.8 +/- 112.8bp
Average Position of motif in Background225.8 +/- 189.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGYTCCC
CACAGN----

POL002.1_INR/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGYTCCC
TCAGTCTT-

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGYTCCC
TKCTGTTCCA

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGYTCCC
ACTACAATTCCC

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGYTCCC
--GCTCCG

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAGYTCCC-----
CGAACAGTGCTCACTAT

grh/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGYTCCC
AGCAGGTA--

abi4/MA0123.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGYTCCC--
CGGTGCCCCC

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGYTCCC-
RGTTAGTGCCCY

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CAGYTCCC--
NNNANTGCAGTGCNNTT