Information for 24-TGGACATA (Motif 18)


Reverse Opposite:

p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.614
Number of Target Sequences with motif6150.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif9395.9
Percentage of Background Sequences with motif12.58%
Average Position of motif in Targets188.8 +/- 116.5bp
Average Position of motif in Background230.1 +/- 206.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TGGACATA---
TACATGTGCACATAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------TGGACATA---
CAGATGTGCACATACGT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGGACATA----
NNATTGGACTTTNGNN

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGACATA
GTGGAT---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGACATA
AATGGAAAAT

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGACATA---
NNNNTTGGGCACNNCN

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGACATA
TGGAAAA-

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGACATA
NNTGGAAANN

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGACATA
AATGGAAAAT

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGACATA
NGTGGGCAT-