Information for 24-TTCCCAGCAACC (Motif 17)


Reverse Opposite:

p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.704
Number of Target Sequences with motif2177.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif2963.7
Percentage of Background Sequences with motif3.97%
Average Position of motif in Targets175.1 +/- 107.1bp
Average Position of motif in Background224.6 +/- 203.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGCAACC-
ATTTCCCAGVAKSCY

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGCAACC
TTTCCCAGAAN--

ACE2/MA0267.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTCCCAGCAACC
--ACCAGCA---

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGCAACC
TGCCCAGNHW--

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGCAACC
ATTTCCAAGAA---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGCAACC
HTTTCCCASG----

SWI5/MA0402.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTCCCAGCAACC
-AACCAGCA---

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGCAACC
TTTCCTGGAAA--

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTCCCAGCAACC-
-SCCTAGCAACAG

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTCCCAGCAACC
NNNTTTCCTGGAAA--