Information for 19-AGGTGGTG (Motif 16)


Reverse Opposite:

p-value:1e-14
log p-value:-3.362e+01
Information Content per bp:1.957
Number of Target Sequences with motif1623.0
Percentage of Target Sequences with motif3.56%
Number of Background Sequences with motif2057.5
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets186.2 +/- 109.3bp
Average Position of motif in Background228.9 +/- 194.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Run/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AGGTGGTG
-GGCGGTG

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGTG-
GAGGTGGGGC

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGTG
AACAGGTGNT-

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGTG----
GCGGAGGTGTCGCCTC

CTCF/MA0531.1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----AGGTGGTG--
CCGCTAGATGGCGCC

RPN4/MA0373.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGGTGGTG
-GGTGGCG

sna/MA0086.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGTG
CAGGTG---

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGTG
NNCAGGTGNN-

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGGTG--
NTCGGTGGTCGC

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGTG-----
NNANTGGTGGTCTTNNN