Information for 20-CTGGAGAGATGG (Motif 14)


Reverse Opposite:

p-value:1e-35
log p-value:-8.171e+01
Information Content per bp:1.964
Number of Target Sequences with motif1542.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif1626.8
Percentage of Background Sequences with motif2.18%
Average Position of motif in Targets168.4 +/- 111.4bp
Average Position of motif in Background220.5 +/- 202.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pros/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGGAGAGATGG
----AGNCATG-

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGGAGAGATGG-
---AACAGATGGC

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGGAGAGATGG
--RGAGAGAG--

SeqBias: GA-repeat

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGGAGAGATGG-
---GAGAGAGAGA

PL0015.1_hlh-2::hlh-14/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGAGAGATGG---
TNNNGACAGGTGTTNN

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGAGAGATGG
ATGGGGTGAT--

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGAGAGATGG-----
AAGGCCAGATGGTCCGG

Unknown2/Drosophila-Promoters/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGAGAGATGG
---TAGKGATG-

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGAGAGATGG
ATGGGGTGAT--

Tal1

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGGAGAGATGG
-----CAGATG-