Information for 19-TTATGTGTATGG (Motif 13)


Reverse Opposite:

p-value:1e-51
log p-value:-1.180e+02
Information Content per bp:1.696
Number of Target Sequences with motif2054.0
Percentage of Target Sequences with motif4.51%
Number of Background Sequences with motif2121.2
Percentage of Background Sequences with motif2.84%
Average Position of motif in Targets176.2 +/- 110.2bp
Average Position of motif in Background226.9 +/- 216.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTATGTGTATGG
-TGTGTGTGTG-

NAC055/MA0937.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTATGTGTATGG
TTACGTGT----

SFP1(MacIsaac)/Yeast

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTATGTGTATGG--
----ATGTACGGGT

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTATGTGTATGG
NNNNTTGTGTGCTTNN

LEC2/MA0581.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTATGTGTATGG-
--ATGTGCATGNN

bap/MA0211.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTATGTGTATGG
TTAAGTG-----

cad/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTGTATGG
TTTATG-------

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTATGTGTATGG-
NNNNTTTGTTTACNNT

RAP1(MacIsaac)/Yeast

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTATGTGTATGG----
----GTGTATGGGTGT

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTGTATGG----
NTTNTATGAATGTGNNC