Information for 13-GCTCACAACC (Motif 12)


Reverse Opposite:

p-value:1e-58
log p-value:-1.351e+02
Information Content per bp:1.655
Number of Target Sequences with motif6676.0
Percentage of Target Sequences with motif14.66%
Number of Background Sequences with motif8538.3
Percentage of Background Sequences with motif11.43%
Average Position of motif in Targets179.2 +/- 105.7bp
Average Position of motif in Background224.9 +/- 194.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCTCACAACC--
CGAAGCACACAAAATA

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTCACAACC----
ATGTCACAACAACAC

HMG-1/MA0044.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTCACAACC
GANTACAAC-

RTG3/Literature(Harbison)/Yeast

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCACAACC
GGTCAC----

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTCACAACC
--TCACACCT

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTCACAACC
--TCACACCT

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTCACAACC
--TCACACCT

YAP1/YAP1_H2O2Lo/3-YAP1(Harbison)/Yeast

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTCACAACC
GCTGACTAA-

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTCACAACC---
-----CAACCGAC

Gam1/MA0034.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCACAACC---
---GACAACCGCC