Information for 16-CATGTGGGTGCT (Motif 11)


Reverse Opposite:

p-value:1e-65
log p-value:-1.505e+02
Information Content per bp:1.708
Number of Target Sequences with motif1398.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif1172.2
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets167.0 +/- 91.3bp
Average Position of motif in Background220.5 +/- 202.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CATGTGGGTGCT
CATGCGGGTAC-

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CATGTGGGTGCT
-----GGGTGC-

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATGTGGGTGCT
CCATGTGCTT---

RCS1(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CATGTGGGTGCT
-----GGGTGCA

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATGTGGGTGCT
GCATGTG------

PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATGTGGGTGCT
NCACGTGVNN---

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CATGTGGGTGCT
TATGCGGGTA--

AFT2(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CATGTGGGTGCT
-----GGGTGCA

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CATGTGGGTGCT-
NNNNATGCGGGTNNNN

AFT1/MA0269.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATGTGGGTGCT--------
CNANNCGGGTGCAATATNNNA