Information for 8-CGCCVGGSSGCG (Motif 4)


Reverse Opposite:

p-value:1e-33
log p-value:-7.752e+01
Information Content per bp:1.590
Number of Target Sequences with motif1241.0
Percentage of Target Sequences with motif5.45%
Number of Background Sequences with motif3045.7
Percentage of Background Sequences with motif3.60%
Average Position of motif in Targets240.0 +/- 150.1bp
Average Position of motif in Background226.6 +/- 114.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF094/MA1049.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CGCCVGGSSGCG
----CGGCGGCG

ERF13/MA1004.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CGCCVGGSSGCG
----TGGCGGCG

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:3
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:CGCCVGGSSGCG
-----GGCGGCG

ERF096/MA0998.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGCCVGGSSGCG-
---NNGGCGGCGN

CRF4/MA0976.1/Jaspar

Match Rank:5
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGCCVGGSSGCG-
-----GGCGGCGC

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGCCVGGSSGCG------
GCCASCAGGGGGCGCYVNNG

ERF4/MA0992.1/Jaspar

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGCCVGGSSGCG-
-----GGCGGCGG

CRF2/MA0975.1/Jaspar

Match Rank:8
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGCCVGGSSGCG-
-----GGCGGCGG

RAP2-6/MA1052.1/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGCCVGGSSGCG-
-----GGCGGCGC

ERF1B/MA0567.1/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CGCCVGGSSGCG
----TGGCGGCG