Information for 22-TTCATCAA (Motif 27)


Reverse Opposite:

p-value:1e-1
log p-value:-3.902e+00
Information Content per bp:1.596
Number of Target Sequences with motif6828.0
Percentage of Target Sequences with motif29.96%
Number of Background Sequences with motif24761.4
Percentage of Background Sequences with motif29.26%
Average Position of motif in Targets199.1 +/- 136.4bp
Average Position of motif in Background230.7 +/- 170.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TTCATCAA------
TCACCCATCAATAAACA

Dbx/MA0174.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTCATCAA
-TAATAAA

Aef1/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTCATCAA
--CAACAA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTCATCAA
ATTGCATCAT

pan/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TTCATCAA-
---ATCAAA

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCATCAA
ATTGCATCAK

Dfd/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTCATCAA
-TCATTAA

Dfd/MA0186.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTCATCAA
-TCATTAA

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTCATCAA
GATTGCATCA-

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCATCAA-------
TATAGATCAAAGGAAAA