Information for 15-TATTGTCC (Motif 26)


Reverse Opposite:

p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.596
Number of Target Sequences with motif9985.0
Percentage of Target Sequences with motif43.81%
Number of Background Sequences with motif35695.2
Percentage of Background Sequences with motif42.18%
Average Position of motif in Targets200.4 +/- 137.8bp
Average Position of motif in Background230.7 +/- 166.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--TATTGTCC
CTCATTGTC-

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TATTGTCC-----
CNNNTATTGTTCNNNNN

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----TATTGTCC-----
AATCAATTGTTCCGCTA

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TATTGTCC----
NNTTTATTGTTCTNNN

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TATTGTCC
NCCATTGTTY

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TATTGTCC----
AANTTATTGTTCTNNA

HMRA1/MA0327.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TATTGTCC
-ATTGTGC

MATA1(MacIsaac)/Yeast

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TATTGTCC
-ATTGTGC

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TATTGTCC----
ANNTCTATTGTTCNNNA

ttk/MA0460.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TATTGTCC--
-ATTATCCTT