Information for 10-CGATCGCG (Motif 22)


Reverse Opposite:

p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.623
Number of Target Sequences with motif1156.0
Percentage of Target Sequences with motif5.07%
Number of Background Sequences with motif3562.8
Percentage of Background Sequences with motif4.21%
Average Position of motif in Targets238.7 +/- 151.3bp
Average Position of motif in Background230.0 +/- 128.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Adf1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CGATCGCG
CGACCGCG

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CGATCGCG---
----CGCGCGG

MBP1/MA0329.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGATCGCG-
--NNCGCGT

SWI6(MacIsaac)/Yeast

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGATCGCG--
----CGCGTC

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGATCGCG--
---ACGCGTT

SWI4/MA0401.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGATCGCG-
-TTTCGCGT

SeqBias: CG-repeat

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGATCGCG--
CGCGCGCGCG

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGATCGCG---
-TTTCGCGTTT

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGATCGCG-
-TTTCGCGT

ZBED1/MA0749.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGATCGCG-----
CTATCGCGACATA