Information for 21-GTATGCACAGCT (Motif 21)


Reverse Opposite:

p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.693
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif172.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets199.0 +/- 135.8bp
Average Position of motif in Background228.6 +/- 170.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTATGCACAGCT-
TNNATTATGCATANNTT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTATGCACAGCT
-----CACAGN-

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTATGCACAGCT-
-----AACAGCTG

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTATGCACAGCT-
NTNTATGTGCACATNNN

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTATGCACAGCT----
GTATTGACAGCTNNTT

vvl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTATGCACAGCT
-TATGCA-----

vvl/MA0254.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTATGCACAGCT
-TATGCA-----

MET4/MA0335.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTATGCACAGCT
----CCACAGTT

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTATGCACAGCT--
----NAACAGCTGG

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GTATGCACAGCT----
------HCAGCTGDTN