Information for 19-CARCAGTCGACA (Motif 18)


Reverse Opposite:

p-value:1e-11
log p-value:-2.717e+01
Information Content per bp:1.565
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets190.4 +/- 116.8bp
Average Position of motif in Background235.6 +/- 195.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

snpc-4/MA0544.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CARCAGTCGACA-
-AGCGGCCGACAC

PL0019.1_hlh-1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CARCAGTCGACA
TGGACAGCTGTCGAGG

PL0015.1_hlh-2::hlh-14/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CARCAGTCGACA
TTAACACCTGTCAAAA

hlh-1/MA0545.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CARCAGTCGACA
GAACAGCTGTC-

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CARCAGTCGACA
NNGCAGCTGTC----

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CARCAGTCGACA
NNGCAGCTGTT----

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CARCAGTCGACA
CAGCTGTT----

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CARCAGTCGACA
CGACCAACTGCCGTG-

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CARCAGTCGACA
NCAGCTGCTG---

DREB1E/MA0978.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CARCAGTCGACA-
-----GCCGACAT