Information for 13-TTAATGGCAA (Motif 17)


Reverse Opposite:

p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.820
Number of Target Sequences with motif270.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif589.3
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets202.9 +/- 125.3bp
Average Position of motif in Background223.7 +/- 164.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pho/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TTAATGGCAA
--AATGGC--

tup/MA0248.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTAATGGCAA
TTAATTG---

Abd-B/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTAATGGCAA-
NCNTTTATGGCNNN

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTAATGGCAA
GTTAATGGCC-

CG11085/MA0171.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAATGGCAA
TTAATTG---

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAATGGCAA
CTAATKGV--

bsh/MA0214.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAATGGCAA
TTAATTG---

CG11085/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTAATGGCAA
NNTTAATTGG--

ftz/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTAATGGCAA
NNGTTAATGACCN

EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTAATGGCAA
ATTTAATGGG--