Information for 18-AGATCCAGAACT (Motif 15)


Reverse Opposite:

p-value:1e-13
log p-value:-3.120e+01
Information Content per bp:1.883
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif65.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets164.0 +/- 106.8bp
Average Position of motif in Background259.1 +/- 164.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA8/MA1017.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGATCCAGAACT
CAGATCTAG----

GAT3/MA0301.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGATCCAGAACT
AGATCTACA---

GAT4/MA0302.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGATCCAGAACT
AAAGATCTAAA---

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGATCCAGAACT
TCAGATCTAC----

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGATCCAGAACT---
NGNTCTAGAACCNGV

ECM23/MA0293.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGATCCAGAACT
AAAGATCTAAA---

GATA9/MA1018.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGATCCAGAACT
NCAGATCTAGN---

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGATCCAGAACT----
NNGATCTAGAACCTNNN

GATA12/MA1015.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGATCCAGAACT
TAGATCTA-----

GATA10/MA1013.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGATCCAGAACT
CAGATCTA-----